Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825086.1_cds_XP_016502202.1_15869
CDS Infomation

[gene=LOC107820431] [db_xref=GeneID:107820431] [protein=zinc finger CCCH domain-containing protein 53-like] [protein_id=XP_016502202.1] [location=complement(join(2651..2849,3062..3209,3278..3487,3563..3639,3732..3911,4001..4183,5115..5920))] [gbkey=CDS]
Sequence

ATGGATACATATGAAGCAACAAAGACAGTTTTGTCAAGAATCCAAAGTTTGGATCCAGAA
AATGCTTCAAAAATCATGGGTTATATACTAATTCAAGACCAAGGAGATAAGGAGATGATA
AGGCTAGCATTTGGGCCAGAAACTGTGTTAATCTCTCTCATTAACCAAGTGAAAAATCGT
TTAGGACTTTCATCGAACAGTTCATCTGCACCTTCAACACCTTCATCTCCTTCACCGTTT
ATTCCCGTTCCAAACCCCAATAAATTCAACCCATTTCCCCATTCATCACCAAGAATCATT
ATACCAAACAATGGGTTTCAATCTTTGCCTTCATCTCCTTGGTCTGGTGGCTCCCCAGTG
TTTTCAAGAAGTCCAAGACCAGTGTCATATGCTTCTGTAGTGAATGGTCCAAACTCAAAT
ACTGCTTCTGGCTCTTCAGATTCTTCTTTATCACTACCTTTTTTCGAGCCAAGTGATGAA
TATTGCAATATTCAAGTTCAAGATCAGTTGTCATTTCTAAATGAGTCGTTTCTTGAGGAA
AGCAGTCATCAAAGTGGTGTTTTTCTTGGTGGGTCCCATGATGATAATAATGGTGGGTTT
GGTGGTTGGAAGCCTTGCATGTATTATGCAAGGGGATTTTGCAAGAATGGGAATAGTTGT
AAGTTTCTGCATGATGGATTTGGGGAGGAAAATACTCCGAGCAATGTTGATTATTTTGAT
GAGATTTTGCGTGTGAAAGCTTTACAGCAACGGCAGAGATTTATGGCTTCCGGTCATCAT
CATCATCATCCATTTGGTTACAACAGATCGGCTGCGGCCGCATTGATGACAAGTGGTGAG
TTCTACAAATATGGTCGGTCCCTACCCGACAGAAATGAATTTTCAGCAATGGCGCTAGGT
GGGATTTCGAATTCTAGTTCGAGACAGATTTACTTGACATTTCCTGCCGATAGCACATTT
AAGGAGGAGGATGTGTCTAATTACTTTAGTATGTACGGCCCGGTGCAAGACGTTAGAATT
CCATATCAGCAGAAGCGAATGTTTGGATTTGTTACATTTGTCTATCCAGAAACCGTGAAG
ATTATCTTGGCCAAAGGGAACCCTCATTTTGTGTGTGATTCTCGCGTGCTTGTTAAACCA
TACAAAGAAAAGGGAAAATTCCCAGACAAGAAGCAATTTCAGCAACAGCAGCAGCCTATT
GATAGAGGAGAGCTCGAGTCCGGGGAGCTCTATGATATTCCCTTTGGAGCAAGGATGTTT
CATAATTCGCACGCGATGATGTTGAGAAGAAAAATAGAGCATGATGCTGAGTTGCAGCAA
GCAATTGAGCTTCAAGGCAGAAGGTTAATGAATTTGCAACTGATGAAGAACCAACATCAC
AATAATCACTTCCAACCCAGCCTCTCTCCGGGTGTTTTTTGTTCGTTTAATGGCATCAAC
CAAGAAGTCTTAGCAGAAAACAAAGGTTTCCAGGAACCCACCGAGCCCCCATCTGATGCA
GCCGATGATAAGGTACCTCAGGAGCTGCTACATACAAATAATGGAAATGGAGGTTCCAAT
AAGGAGCAGACCTCGAATACCGATGATTCTTATCCTCGAGAAAGCTTGGAGCACATCCTT
CCTGATAACTTATTTACTTCTCCCACGAAATCGGTTGCAGAACAACATGTCGCGTTTTCC
ATTGATTCAGCTGAAGCTGACGTTAGTTCCGCGATGACAACGCCAGCAACAACACCAACA
ATAACTACTAACAGCGTCCCTATGCCTCCCGCCACTTCTGCTCTTCAACATTACGTCTCT
TAA

Peptide Sequence

PEP ID

XP_016502202.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 53-like [Nicotiana tabacum]
Sequence

MDTYEATKTVLSRIQSLDPENASKIMGYILIQDQGDKEMIRLAFGPETVLISLINQVKNR
LGLSSNSSSAPSTPSSPSPFIPVPNPNKFNPFPHSSPRIIIPNNGFQSLPSSPWSGGSPV
FSRSPRPVSYASVVNGPNSNTASGSSDSSLSLPFFEPSDEYCNIQVQDQLSFLNESFLEE
SSHQSGVFLGGSHDDNNGGFGGWKPCMYYARGFCKNGNSCKFLHDGFGEENTPSNVDYFD
EILRVKALQQRQRFMASGHHHHHPFGYNRSAAAALMTSGEFYKYGRSLPDRNEFSAMALG
GISNSSSRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVK
IILAKGNPHFVCDSRVLVKPYKEKGKFPDKKQFQQQQQPIDRGELESGELYDIPFGARMF
HNSHAMMLRRKIEHDAELQQAIELQGRRLMNLQLMKNQHHNNHFQPSLSPGVFCSFNGIN
QEVLAENKGFQEPTEPPSDAADDKVPQELLHTNNGNGGSNKEQTSNTDDSYPRESLEHIL
PDNLFTSPTKSVAEQHVAFSIDSAEADVSSAMTTPATTPTITTNSVPMPPATSALQHYVS

Transcript Sequence

Gene sequence data has not been registered.